BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031E04SP1|AL429406
(949 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1671 1574 0.0
3x_Contig1746 156 1e-37
3x_Contig384 150 6e-36
3x_Contig1276 146 1e-34
3x_Contig1625 142 2e-33
>3x_Contig1671
Length = 12265
Score = 1574 bits (789), Expect = 0.0
Identities = 811/821 (98%), Gaps = 2/821 (0%)
Strand = Plus / Plus
Query: 130 gatgggctgatgattgtgtwaataaatggaacagcggcaggttattgttttaccctgata 189
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 4825 gatgggctgatgattgtgttaataaatggaacagcggcaggttattgttttaccctgata 4884
Query: 190 tgcatctcaaactgtcagtatgtgtaatatcgaataattcatacctgtcttcaacgttta 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4885 tgcatctcaaactgtcagtatgtgtaatatcgaataattcatacctgtcttcaacgttta 4944
Query: 250 tttctaattgcgggttaaygtacgggaaaacctgttaaataaaaaaaaaaagaaaataga 309
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4945 tttctaattgcgggttaatgtacgggaaaacctgttaaataaaaaaaaaaagaaaataga 5004
Query: 310 gaacgagcatgttgtggcacatttgagcawatttatactgtaggtctcctcagtttgaga 369
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 5005 gaacgagcatgttgtggcacatttgag-atatttatactgtaggtctcctcagtttgaga 5063
Query: 370 tcaacttgaaggtcattcaagcttttatctgtttgaggaggtcctgggacacaaatgaga 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5064 tcaacttgaaggtcattcaagcttttatctgtttgaggaggtcctgggacacaaatgaga 5123
Query: 430 aaacagcacaataaccattcagtaaaatacgagtgacaagcgactyaccgttgagcyaag 489
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 5124 aaacagcacaataaccattcagtaaaatacgagtgacaagcgacttaccgttgagctaag 5183
Query: 490 ttgtcaaccatgactttcaacgaaagttgctgctttagctcagtygggagagcgtatgac 549
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5184 ttgtcaaccatgactttcaacgaaagttgctgctttagctcagttgggagagcgtatgac 5243
Query: 550 tgaagttcataaggtcctgtgttcgatccacagaagcagcatttcgatttatttttattg 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5244 tgaagttcataaggtcctgtgttcgatccacagaagcagcatttcgatttatttttattg 5303
Query: 610 tcctttttgttgtccacgtgacaactattcgcatgtattcccgttctaaagaaaaaagtc 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5304 tcctttttgttgtccacgtgacaactattcgcatgtattcccgttctaaagaaaaaagtc 5363
Query: 670 aatttgtcgatgaagaaaatcttgaaatttcgttgaacaaagttttattctctctctctt 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5364 aatttgtcgatgaagaaaatcttgaaatttcgttgaacaaagttttattctctctctctt 5423
Query: 730 ccaaaagttctttatgtgttgaggtaattaaagagctttcatctcctcagatcaacccaa 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5424 ccaaaagttctttatgtgttgaggtaattaaagagctttcatctcctcagatcaacccaa 5483
Query: 790 ttaactcaattgaaccatcataactaacataatgtctgadattgcccaagactccaacgt 849
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5484 ttaactcaattgaaccatcataactaacataatgtctgaaattgcccaagactccaacgt 5543
Query: 850 ttccattttttccaaaaatgaaaagaaggccagagaattgatcctaaagttgggattgaa 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5544 ttccattttttccaaaaatgaaaagaaggccagagaattgatcctaaagttgggattgaa 5603
Query: 910 g-cmatccaaggtgtttctagagtcactttcaagaagaagg 949
| | |||||||||||||||||||||||||||||||||||||
Sbjct: 5604 gccaatccaaggtgtttctagagtcactttcaagaagaagg 5644
Score = 195 bits (98), Expect = 1e-49
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 taacatcgtcttagaactacaggtctgtaaatggtagatgaaaggatgggccttgaacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4704 taacatcgtcttagaactacaggtctgtaaatggtagatgaaaggatgggccttgaacct 4763
Query: 61 gatcttgcagccgttacccaagataatgaatgtcgaaa 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 4764 gatcttgcagccgttacccaagataatgaatgtcgaaa 4801
>3x_Contig1746
Length = 26672
Score = 156 bits (78), Expect = 1e-37
Identities = 88/92 (95%)
Strand = Plus / Plus
Query: 513 aagttgctgctttagctcagtygggagagcgtatgactgaagttcataaggtcctgtgtt 572
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 12142 aagtcgctgctttagctcagttgggagagcgtatgactgaagttcataaggtcctgtgtt 12201
Query: 573 cgatccacagaagcagcatttcgatttatttt 604
|||||||||||||||||||||| ||||||||
Sbjct: 12202 cgatccacagaagcagcatttctttttatttt 12233
>3x_Contig384
Length = 1678
Score = 150 bits (75), Expect = 6e-36
Identities = 76/77 (98%)
Strand = Plus / Minus
Query: 518 gctgctttagctcagtygggagagcgtatgactgaagttcataaggtcctgtgttcgatc 577
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1518 gctgctttagctcagttgggagagcgtatgactgaagttcataaggtcctgtgttcgatc 1459
Query: 578 cacagaagcagcatttc 594
|||||||||||||||||
Sbjct: 1458 cacagaagcagcatttc 1442
>3x_Contig1276
Length = 6662
Score = 146 bits (73), Expect = 1e-34
Identities = 77/79 (97%)
Strand = Plus / Minus
Query: 513 aagttgctgctttagctcagtygggagagcgtatgactgaagttcataaggtcctgtgtt 572
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 710 aagtcgctgctttagctcagttgggagagcgtatgactgaagttcataaggtcctgtgtt 651
Query: 573 cgatccacagaagcagcat 591
|||||||||||||||||||
Sbjct: 650 cgatccacagaagcagcat 632
>3x_Contig1625
Length = 13618
Score = 142 bits (71), Expect = 2e-33
Identities = 72/73 (98%)
Strand = Plus / Minus
Query: 518 gctgctttagctcagtygggagagcgtatgactgaagttcataaggtcctgtgttcgatc 577
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8392 gctgctttagctcagttgggagagcgtatgactgaagttcataaggtcctgtgttcgatc 8333
Query: 578 cacagaagcagca 590
|||||||||||||
Sbjct: 8332 cacagaagcagca 8320
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,597
Number of Sequences: 1807
Number of extensions: 13597
Number of successful extensions: 217
Number of sequences better than 1.0e-20: 5
length of query: 949
length of database: 10,358,551
effective HSP length: 16
effective length of query: 933
effective length of database: 10,329,639
effective search space: 9637553187
effective search space used: 9637553187
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)